PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P23220_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 265aa    MW: 29983.8 Da    PI: 7.0734
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P23220_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like925.2e-29139194156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r+ W+++LH+rF++a++qLGG + A Pk+i+elmkv+gLt+++vkSHLQkYRl+
  GSMUA_Achr1P23220_001 139 KTRRWWSEDLHKRFLDALQQLGGCHAAKPKHIRELMKVDGLTNDEVKSHLQKYRLH 194
                            6899**************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.353136196IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.7E-26137197IPR009057Homeodomain-like
SuperFamilySSF466891.88E-16138197IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-25139194IPR006447Myb domain, plants
PfamPF002494.3E-7144192IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDDRSEKAFW YDELIDALKE ERRKIQVFRR ELPLCLHLID QTIENYMQLM MMEDTVRTSN  60
ETVLKEFISL KPCSGASEEN KDPDPVPEKD RVRKPVAVEA RKVREDAHPG DKEDDLGSEG  120
GEGKGGDGED KKKSASQGKT RRWWSEDLHK RFLDALQQLG GCHAAKPKHI RELMKVDGLT  180
NDEVKSHLQK YRLHARRRRS TAVENPSAGV PQLVVLGGIW IPPPGYGVAA ATHPVVNEPR  240
NGTHPSLPFP SSNSVLEHQN QYNII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009407257.10.0PREDICTED: transcription factor LUX isoform X1
TrEMBLM0S2D00.0M0S2D0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P23220_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64703754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.18e-44G2-like family protein