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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr1P16280_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
HD-ZIP |
Protein Properties |
Length: 220aa MW: 25338.8 Da PI: 4.6052 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr1P16280_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 63 | 4.4e-20 | 27 | 78 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++f++eq++ Le+ Fe + ++ a+++++LA++lgL+ rqV +WFqN+Ra++k
GSMUA_Achr1P16280_001 27 RRFSEEQIRSLESTFEAQTKLEARQKQQLARELGLQPRQVGIWFQNKRARWK 78
38*************************************************9 PP
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2 | HD-ZIP_I/II | 111.1 | 7.2e-36 | 25 | 113 | 2 | 90 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+ rr+s+eq+++LE++Fe+++kLe ++K++lareLglqprqv +WFqn+RAR+k+kql+++y+aL++ ydal ++ ++L+ke++ L +
GSMUA_Achr1P16280_001 25 RTRRFSEEQIRSLESTFEAQTKLEARQKQQLARELGLQPRQVGIWFQNKRARWKSKQLDREYRALRADYDALLSRFDSLNKEKQLLLK 112
789********************************************************************************99876 PP
HD-ZIP_I/II 90 e 90
+
GSMUA_Achr1P16280_001 113 Q 113
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MGESEERCGG EEEEECCSKS SKGDRTRRFS EEQIRSLEST FEAQTKLEAR QKQQLARELG 60 LQPRQVGIWF QNKRARWKSK QLDREYRALR ADYDALLSRF DSLNKEKQLL LKQRQGLTEL 120 LDKTEKNDRD AASKEKEWPR PSLKEEPDLE FAGCTEEEED DDDNTLSYLC EDEPGPRAVQ 180 PATSSVPSSA EKQLHSATGR AAAQTSCSNS PWWEFWPLSE
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |