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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr1P15600_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
Trihelix |
Protein Properties |
Length: 299aa MW: 33309.1 Da PI: 4.6319 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr1P15600_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 42.2 | 2e-13 | 50 | 121 | 2 | 73 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73
Wt e l+L+ m+e+ ++ + ++W+ +s+++ + + rs++qCk +we+l y++i+e+e ++ +
GSMUA_Achr1P15600_001 50 WTTYESLVLVGEIAAMDEDWLKALSSYQKWKMISDNCVALEVVRSSNQCKRRWESLLAGYRRIREWEASHGE 121
99******************************************************************9833 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MEHPGTIRAP PATPRKNKED QRAKRSAATS SPPAPASSSR CTRSQAAPDW TTYESLVLVG 60 EIAAMDEDWL KALSSYQKWK MISDNCVALE VVRSSNQCKR RWESLLAGYR RIREWEASHG 120 EGSYWVLDGD RRQQLGLPTW FDREVFSSMG AVLKLQEDWA GRGEADPEYV VDAAGASEDL 180 LLSAEAEMLD VNNAQGSKEN SEDEVQKDRE KTRDMASKLQ ESAQQIHAIL REELEDNLGL 240 DTSPVDLSKP NAAGIEFTRR QADRLIKAFG GLADTLNQFT ELIRSSDCES IKAIDSMAL
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 2e-37 | sequence-specific DNA binding transcription factors |