 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr10P30330_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 263aa MW: 29542.1 Da PI: 4.8932 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr10P30330_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.3 | 3.2e-19 | 47 | 100 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq+++Le+ Fe ++++ e++ +LAk+lgL+ rqV vWFqNrRa++k
GSMUA_Achr10P30330_001 47 KKRRLSTEQVRALEKNFEVENKLEPERKVRLAKELGLQPRQVAVWFQNRRARWK 100
45689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 134.1 | 5e-43 | 47 | 138 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
kkrrls+eqv++LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy+aL+++ydal+ + ++L++++e+L
GSMUA_Achr10P30330_001 47 KKRRLSTEQVRALEKNFEVENKLEPERKVRLAKELGLQPRQVAVWFQNRRARWKTKQLEHDYAALRTSYDALRLDFDSLHRDKESLL 133
9*************************************************************************************9 PP
HD-ZIP_I/II 89 eelke 93
+++++
GSMUA_Achr10P30330_001 134 SQIDD 138
99875 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MTSWLAGEDQ EDVYGGDFQP IMEGLDEDDG GGDEELCAAT TAGGGAKKRR LSTEQVRALE 60
KNFEVENKLE PERKVRLAKE LGLQPRQVAV WFQNRRARWK TKQLEHDYAA LRTSYDALRL 120
DFDSLHRDKE SLLSQIDDLK AKLAETEGLS LSFSSSAKEG PAVPETAAKA PESEDPPAAI 180
CKDGSSSSDS SAVHHEVLKM EEEELLCEPC CSFFSDEQAA TLNCPKKREN RWEKKELNIK 240
KRSNFIRKLL GKMLINLDNF KFG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 94 | 102 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
