PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P30100_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 173aa    MW: 19229.6 Da    PI: 6.9191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P30100_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-183988255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            +y+GVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  GSMUA_Achr10P30100_001 39 QYRGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 88
                            69****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.2E-313897IPR001471AP2/ERF domain
PfamPF008472.4E-113988IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-203998IPR016177DNA-binding domain
SMARTSM003801.8E-3439102IPR001471AP2/ERF domain
PROSITE profilePS5103221.8123996IPR001471AP2/ERF domain
CDDcd000187.85E-213998No hitNo description
PRINTSPR003673.2E-94051IPR001471AP2/ERF domain
PRINTSPR003673.2E-96278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MVKNSSSKVL QAADGHIGVA NNPHGTNFPP KLGSNGKRQY RGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TPEAAARAYD AALLCLKGNS ARLNFPTSPC IQLPDTTMSP RTTSHEEEGM  120
LSGHFLMDPS INFEAFFQSP KCMDYMLNAS AFFAPSQSEE WEEEGDITLW SFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009381465.11e-112PREDICTED: ethylene-responsive transcription factor ERF014-like
TrEMBLM0RMN41e-128M0RMN4_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P30100_0011e-128(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-26ERF family protein