PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr10P26120_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

VOZ

Protein Properties

Length: 768aa MW: 87003.9 Da PI: 7.7636

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr10P26120_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438.7	7.7e-135	478	694	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 pppsafl+pkcalwdc+rpa+gsew++dycssfhatlalneg+pg+tpvlrp+gidlkdg+lfaal ak++gk+vgipecegaat+k GSMUA_Achr10P26120_001 478 PPPSAFLRPKCALWDCPRPARGSEWFEDYCSSFHATLALNEGPPGMTPVLRPGGIDLKDGPLFAALIAKTHGKNVGIPECEGAATNK 564 89*********************************************************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdl +l+ge++rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqp+ ++ewhlyeyei GSMUA_Achr10P26120_001 565 SPWNAPELFDLLVLNGESVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLRHYEWHLYEYEI 651 *********************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelklvd kks kgkv++dsl+dlq+++grl+a GSMUA_Achr10P26120_001 652 NNCDACALYRLELKLVDPKKSIKGKVTSDSLVDLQQQMGRLNA 694 **************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence Send to blast
MMCGDWPKKV PLRLSWCDGW CGLLDHGGLM CSIICPTELL EACRGPFPAI YLLVTSLLSC 60 KQERDNNNND NNTNKEEEDK LYFSRKKKTS LLTISARRIR HFYRSEGMRK RSGGVGGAVL 120 HHHHRRWALR EKAKNRVNDL QGMFADVQSA HKEGRSADAA VLEEQLHQLL REWKAELGEP 180 SPAASAASSL PKGNSRGPSD LSSYIRRMLQ LNEEDDDATS KLAEPPLTSA NPKDEPLDVL 240 GPDVGELQSG GVAVFQCILR TYLRDWLRVD FRRSFPTSFL ITRVRKLLMG KPFVIIQIII 300 SLLLGVMTLC SFFLLVTCTC ETSAACHRSA PSIVTFLLHL KTFQNLTKYI ILNDFHVLLC 360 YLFSLIVPLV LICFIFNIFG QFSGFLSSCS LRRLNLKEHL IYEMPDYVFL GTQQFKCGSI 420 EAQRAALHCL EEANNLEFHH YNPHQELPQS VFLGFNAGGF DVGDLTPFLS EFIPAICPPP 480 SAFLRPKCAL WDCPRPARGS EWFEDYCSSF HATLALNEGP PGMTPVLRPG GIDLKDGPLF 540 AALIAKTHGK NVGIPECEGA ATNKSPWNAP ELFDLLVLNG ESVREWLFFD KPRRAFESGN 600 RKQRSLPDYS GRGWHESRKQ VMKEFGGLKR SYYMDPQPLR HYEWHLYEYE INNCDACALY 660 RLELKLVDPK KSIKGKVTSD SLVDLQQQMG RLNAENTMDS KRYAKGRPRF QYKDSAETMY 720 SALDFINQME NGESLHSSLD QKALVCDGVV YMRRFQTPVD DLNGYYGT

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence Send to blast

MMCGDWPKKV PLRLSWCDGW CGLLDHGGLM CSIICPTELL EACRGPFPAI YLLVTSLLSC  60
KQERDNNNND NNTNKEEEDK LYFSRKKKTS LLTISARRIR HFYRSEGMRK RSGGVGGAVL  120
HHHHRRWALR EKAKNRVNDL QGMFADVQSA HKEGRSADAA VLEEQLHQLL REWKAELGEP  180
SPAASAASSL PKGNSRGPSD LSSYIRRMLQ LNEEDDDATS KLAEPPLTSA NPKDEPLDVL  240
GPDVGELQSG GVAVFQCILR TYLRDWLRVD FRRSFPTSFL ITRVRKLLMG KPFVIIQIII  300
SLLLGVMTLC SFFLLVTCTC ETSAACHRSA PSIVTFLLHL KTFQNLTKYI ILNDFHVLLC  360
YLFSLIVPLV LICFIFNIFG QFSGFLSSCS LRRLNLKEHL IYEMPDYVFL GTQQFKCGSI  420
EAQRAALHCL EEANNLEFHH YNPHQELPQS VFLGFNAGGF DVGDLTPFLS EFIPAICPPP  480
SAFLRPKCAL WDCPRPARGS EWFEDYCSSF HATLALNEGP PGMTPVLRPG GIDLKDGPLF  540
AALIAKTHGK NVGIPECEGA ATNKSPWNAP ELFDLLVLNG ESVREWLFFD KPRRAFESGN  600
RKQRSLPDYS GRGWHESRKQ VMKEFGGLKR SYYMDPQPLR HYEWHLYEYE INNCDACALY  660
RLELKLVDPK KSIKGKVTSD SLVDLQQQMG RLNAENTMDS KRYAKGRPRF QYKDSAETMY  720
SALDFINQME NGESLHSSLD QKALVCDGVV YMRRFQTPVD DLNGYYGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009381028.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	1e-139	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M0RLI6	0.0	M0RLI6_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr10P26120_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-142	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]