PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P26050_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family WRKY
Protein Properties Length: 510aa    MW: 54703.8 Da    PI: 6.7647
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P26050_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30293351259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                              Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  GSMUA_Achr10P26050_001 293 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRCAEDRSILITTYEGTHNHP 351
                             7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF066961.2E-4134152IPR009578Cell surface antigen repeat
Gene3DG3DSA:2.20.25.809.9E-34277353IPR003657WRKY domain
SuperFamilySSF1182904.84E-28285353IPR003657WRKY domain
PROSITE profilePS5081129.585287353IPR003657WRKY domain
SMARTSM007741.0E-36292352IPR003657WRKY domain
PfamPF031063.2E-27294351IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MDKGGTTGVG LTLNTSGSFF VPSTLDHRGG GLGRHRSMGS DLNHLCSSSG GSEFTDMTRV  60
AVNEMDFFSE ERKKAFSKVE NDLDLMLPSS CVKKEDLTIH TGLNLLTANA GNDESMVDNK  120
LSPTKDHKES KTELAAMESE LARVKEENQK LQEMVEQATT NYNALQKHLV ALMRQQHQSN  180
RHPPRDHEEH GGVLVPRQFM DLGAAVEADE PSHSSTASQD RPPGSTDHRL HGGSNKKEIA  240
PPDHGSSFRE EKPDHPNKAP KLTPAGVTEQ AQEAIMRKAR VSVRARSEAP MITDGCQWRK  300
YGQKMAKGNP CPRAYYRCTM ASGCPVRKQV QRCAEDRSIL ITTYEGTHNH PLPPAAMAMA  360
STTSAAASML LSGSIMATIS ASAPFPTVTL DLTHSPNAAQ LQRPPTQFQI FGQALYDPSK  420
FSSLQSALPP SSLTDTVSAA TAAITADPNF TAALAAAISS IIGGNHQAAS HNDDTKSSAN  480
KTTSDGNDDD KTNNSKDDAS NSASPNFPAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21279355176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009381020.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC31e-116WRK42_ARATH; WRKY transcription factor 42
TrEMBLM0RLH90.0M0RLH9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P26050_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.12e-96WRKY DNA-binding protein 31