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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr10P25670_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
HD-ZIP |
| Protein Properties |
Length: 190aa MW: 21869.2 Da PI: 9.9058 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr10P25670_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.9 | 1.7e-18 | 29 | 82 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq ++Le+ Fe +++++ +++ +LA+ lgL+ rqV vWFqNrR ++k
GSMUA_Achr10P25670_001 29 KKRRLSMEQARALEKNFEVENKLDPARKLRLAQDLGLQPRQVAVWFQNRRSRWK 82
45689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 125 | 3.4e-40 | 28 | 120 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87
ekkrrls eq+++LE++Fe e+kL+p rK +la++LglqprqvavWFqnrR R+ktkq+E+dy Lk+++dalk + ++L++++e+L
GSMUA_Achr10P25670_001 28 EKKRRLSMEQARALEKNFEVENKLDPARKLRLAQDLGLQPRQVAVWFQNRRSRWKTKQVERDYGNLKAQHDALKLDCDALRHDKEAL 114
69************************************************************************************* PP
HD-ZIP_I/II 88 reelke 93
+e+++
GSMUA_Achr10P25670_001 115 IAEIRD 120
999875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MVKDEAFLLD GMEEMECEEE LRSNGLGEKK RRLSMEQARA LEKNFEVENK LDPARKLRLA 60
QDLGLQPRQV AVWFQNRRSR WKTKQVERDY GNLKAQHDAL KLDCDALRHD KEALIAEIRD 120
LKAKLSASEM DAAEEARPPL IYWKKEKPNS AVRKSLSVRA VGFKMRAVKI NNFICAGCFG 180
KQKHISNTIG
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
