 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSMUA_Achr10P24810_001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
Family |
HD-ZIP |
Protein Properties |
Length: 247aa MW: 27195.6 Da PI: 5.4486 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr10P24810_001 | genome | CIRAD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 61.2 | 1.6e-19 | 10 | 63 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++++q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
GSMUA_Achr10P24810_001 10 KKRRLSADQVRALEKNFEVDNKLEPERKVRLAQELGLQPRQVAVWFQNRRARWK 63
45689************************************************9 PP
|
2 | HD-ZIP_I/II | 132.3 | 1.7e-42 | 10 | 101 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
kkrrls++qv++LE++Fe ++kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy+aLk++yd+l+ + ++L++++e+L
GSMUA_Achr10P24810_001 10 KKRRLSADQVRALEKNFEVDNKLEPERKVRLAQELGLQPRQVAVWFQNRRARWKTKQLEHDYAALKASYDQLRLDCDALRRDKESLL 96
9************************************************************************************** PP
HD-ZIP_I/II 89 eelke 93
+e+ke
GSMUA_Achr10P24810_001 97 AEIKE 101
99987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MCSGGPRGAK KRRLSADQVR ALEKNFEVDN KLEPERKVRL AQELGLQPRQ VAVWFQNRRA 60 RWKTKQLEHD YAALKASYDQ LRLDCDALRR DKESLLAEIK ELRAKLAEDG SLSFCLGKED 120 PVASDAEQKA TAPQEPPPLI CKDGSSDSDS SAVLNDAILN DDDSPRGLSS SASAPNILSV 180 AAIGYGTFSS FPASPPPLLN LDFRTLKPIG GLNHQNHAMK IEELLGVVEP CSGFFSDDQT 240 PSPNWFY
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |