 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr10P18860_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 286aa MW: 32417.3 Da PI: 6.1109 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr10P18860_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 54.8 | 1.6e-17 | 86 | 138 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +++ eq+++Le+ Fe +++ e++ +LA+ lgL rqV +WFqNrRa++k
GSMUA_Achr10P18860_001 86 KKRLNIEQVRTLERNFELGNKLEPERKMQLARALGLRPRQVAIWFQNRRARWK 138
4568889*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.5 | 2.9e-41 | 84 | 174 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87
ekk+rl+ eqv++LE++Fe +kLeperK++lar+Lgl+prqva+WFqnrRAR+ktkqlEkdy++Lkr+++a+k+ene+L++++++L
GSMUA_Achr10P18860_001 84 EKKKRLNIEQVRTLERNFELGNKLEPERKMQLARALGLRPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFEAIKTENEALQSQNKKL 170
69************************************************************************************* PP
HD-ZIP_I/II 88 reel 91
r+e+
GSMUA_Achr10P18860_001 171 RAEI 174
*987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MACNGMASSS SFPSNFMFHT ETPYEEGNQL TAPLGSLLHT GPQDLRGGVA PVMGKRSISF 60
PGIESCEEMN ADDDLSDDGW QAGEKKKRLN IEQVRTLERN FELGNKLEPE RKMQLARALG 120
LRPRQVAIWF QNRRARWKTK QLEKDYDVLK RQFEAIKTEN EALQSQNKKL RAEILAFRGT 180
ETSDMINLNK ETEGSCSNRS ENSSEINIDI SRTSVIESSL PPHQILPYFP SIRPADINQL 240
LHNSCKPEFQ CAKVENEAPE VSFSNLLGSM GDQSALWSWP DHHHFH
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 132 | 140 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
