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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr10P12800_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | EIL | ||||||||
Protein Properties | Length: 522aa MW: 58757.4 Da PI: 6.584 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 470.2 | 1.4e-143 | 72 | 361 | 1 | 289 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 eel++rmw+d+++lkrlke+++++ ke+ +a+k+ +s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+ga GSMUA_Achr10P12800_001 72 EELERRMWRDRVRLKRLKEQQQNKN--KEQ-GDAAKQWQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGA 155 8*********************965..777.89****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS EIN3 88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174 sd+Lr+WWkekv+fdrngpaai+kyqa+n i++++++ +++++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP GSMUA_Achr10P12800_001 156 SDNLRGWWKEKVRFDRNGPAAIAKYQADNTIPGSNNEV-VSSTVSPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWP 241 *********************************99998.669********************************************* PP -S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS EIN3 175 tGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261 tG+e+ww++ g++++qg+ppykkphdlkkawkvsvLtavikh+sp+ie+ir+l+rqsk+lqdkm+ake +++l+v++qee+++ +++ GSMUA_Achr10P12800_001 242 TGREEWWPQSGIPNEQGPPPYKKPHDLKKAWKVSVLTAVIKHISPDIEKIRRLVRQSKCLQDKMTAKEIATWLAVVKQEEDMYMKLH 328 *************************************************************************************** PP XX...XX...XXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 262 ah...ss...slrkqspkvtlsceqkedvegkke 289 ++ ++ s +++ +++ sc+ ++dveg+ + GSMUA_Achr10P12800_001 329 PDtclPPssgSGLTGAISFNTSCG-DYDVEGRTA 361 **8863334455559999999999.999997654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.0E-130 | 72 | 321 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.1E-73 | 196 | 331 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.27E-60 | 200 | 325 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 522 aa Download sequence Send to blast |
MGGLLMEGMV YPGGPNYVQL FPSNDEKNLC YGSLHQPSMG ECIMGEGDLV DPPPEKFAEV 60 GDEESDEDID IEELERRMWR DRVRLKRLKE QQQNKNKEQG DAAKQWQSQE QARRKKMSRA 120 QDGILKYMLK MMEVCKAQGF VYGIIPEKGK PVSGASDNLR GWWKEKVRFD RNGPAAIAKY 180 QADNTIPGSN NEVVSSTVSP HSLQELQDTT LGSLLSALMQ HCDPPQRRFP LEKGVAPPWW 240 PTGREEWWPQ SGIPNEQGPP PYKKPHDLKK AWKVSVLTAV IKHISPDIEK IRRLVRQSKC 300 LQDKMTAKEI ATWLAVVKQE EDMYMKLHPD TCLPPSSGSG LTGAISFNTS CGDYDVEGRT 360 AAEPELLLNQ RIYTCDNAKC PHHDFCHGFT DRNARNSHQY LCKYQNTFPQ SIGALLNPIS 420 VSDLGIPSDG QKSINELMGF YDNNISGDKS LTLGMGSLVQ QPQFFVREDM MPFGQQFSNQ 480 PNESSGGFRF TSGLNIPAVD YSNAASQRGM LQKKHDGSNW FY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 6e-73 | 199 | 331 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 6e-73 | 199 | 331 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB266319 | 0.0 | AB266319.1 Musa acuminata AAA Group MA-EIL2 mRNA for ethylene signal transcription factor, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009420955.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_018675190.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q10M41 | 0.0 | EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a | ||||
TrEMBL | M0RHQ6 | 0.0 | M0RHQ6_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr10P12800_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-159 | ETHYLENE-INSENSITIVE3-like 1 |
Publications ? help Back to Top | |||
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