PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P08270_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 391aa    MW: 42708.4 Da    PI: 6.2735
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P08270_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.9e-31252307156
                 G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                             k+r++W++eLH+rFv a+eqLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  GSMUA_Achr10P08270_001 252 KARRCWSTELHRRFVLALEQLGGAQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 307
                             68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.287249309IPR017930Myb domain
SuperFamilySSF466892.93E-17250310IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28251310IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-25252307IPR006447Myb domain, plants
PfamPF002491.6E-6254305IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MGPSVAGIGL DLNLCAMTTV GGFLEEAVTA VESVDSKVAK LEESVRSLEE ERRKIEAFKR  60
ELPLCMLLIT DVIEGLKKEL ERCRGERFAR ACEAHNPINS KCGEEGGVKL ESESKNKTSW  120
MSSAQLWTTV NNNKDDYSIT EERNAKAARR EEESLFSESK SRRPVGAFVP FKGMSPFVMN  180
SKEEVKPRVM LPDLPLQSPA VRNAFCPISA AAEDHSLSLS GSQGVGGAAA SALAMAGTCL  240
SLQVQQQQPP RKARRCWSTE LHRRFVLALE QLGGAQVATP KQIRELMQVD GLTNDEVKSH  300
LQKYRLHARK MPNSSPIVDQ PVVVLRGLWV PPENYTTSPQ QSVSLSGSPQ SPLQLAGSNL  360
AVSATAGDSC EEDGRSECCN WTWGEVSAEH I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009420714.10.0PREDICTED: myb family transcription factor EFM-like
TrEMBLM0RGF30.0M0RGF3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P08270_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.17e-48G2-like family protein