PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr10P00420_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 234aa MW: 25745.9 Da PI: 10.2711 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.6 | 1.6e-14 | 163 | 210 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+R++a++ eLe+kv Le+eN++L k el GSMUA_Achr10P00420_001 163 RRQKRMIKNRESAARSRARRQAYTNELENKVVLLEEENQRLVKHKAEL 210 79**************************************98876666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PRINTS | PR00041 | 2.3E-5 | 158 | 174 | IPR001630 | cAMP response element binding (CREB) protein |
SMART | SM00338 | 1.9E-9 | 159 | 212 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.231 | 161 | 211 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-11 | 163 | 211 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-13 | 163 | 211 | No hit | No description |
Pfam | PF00170 | 1.3E-12 | 163 | 211 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 166 | 181 | IPR004827 | Basic-leucine zipper domain |
PRINTS | PR00041 | 2.3E-5 | 176 | 196 | IPR001630 | cAMP response element binding (CREB) protein |
PRINTS | PR00041 | 2.3E-5 | 196 | 213 | IPR001630 | cAMP response element binding (CREB) protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MADHGGGRDQ QLQPLTDAEH GSFHGLMLNE VQSRLGGPLH GLSLGDLLEH APLVADGLRC 60 SWSGGVPRVL SKKTIVEAWR DIQLRHEEGS SERAVLGEMT VEDFLPKAGA AAQGTDSGVA 120 DAHAVRSPGR GSNSSAAAAT APPRSRRRRR VATEDVAEKM VERRQKRMIK NRESAARSRA 180 RRQAYTNELE NKVVLLEEEN QRLVKHKAEL EAVERSMPHP DPKHQLRRTS SAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018674994.1 | 1e-145 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 4e-42 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | M0RE69 | 1e-168 | M0RE69_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr10P00420_001 | 1e-169 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 3e-21 | bZIP family protein |
Publications ? help Back to Top | |||
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