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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00148122001 |
Common Name | GSBRNA2T00148122001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
AP2 |
Protein Properties |
Length: 310aa MW: 35102.7 Da PI: 8.0542 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00148122001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 45.1 | 2.6e-14 | 49 | 109 | 1 | 55 |
AP2 1 sgykGV.rwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s ++GV ++++++gr++A+++d s+n k+ ++++lg ++ +e Aa+a++ a++k++g
GSBRNA2T00148122001 49 SSHRGVtSRHRWTGRYEAHLWDkNSWNEtqtKKgRQVYLGAYDEEEAAARAYDLAALKYWG 109
579****9**************888877878557*************************98 PP
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2 | AP2 | 54 | 4.2e-17 | 152 | 203 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g
GSBRNA2T00148122001 152 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAARAYDIAAIEYRG 203
89****99**********99966...3.6*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
GO:1904278 | Biological Process | positive regulation of wax biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MAKLSQRNKK IIEDETIDKT ATASASPVVF KCKRKRKSPP QNAPPQRSSS HRGVTSRHRW 60 TGRYEAHLWD KNSWNETQTK KGRQVYLGAY DEEEAAARAY DLAALKYWGR DTLLNFPLST 120 YEEDVKEMEA HSKEEYIGSL RRKSSGFSRG VSKYRGVARH HHNGRWEARI GRVFGNKYLY 180 LGTYATQEEA ARAYDIAAIE YRGLNAVTNF DVSRYLDLPA TKKPNAAASP ESPNDQTSSD 240 DNNFTKTEEV TEPSTPPEAI QSRRSFPDDI QTYFECQDSG KSATEEDVIF GGFSSFISPG 300 LCNEFDYWS*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK352786 | 0.0 | AK352786.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-07-M17. |