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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00107626001 |
Common Name | GSBRNA2T00107626001, LOC106448694 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 357aa MW: 40718.6 Da PI: 8.8215 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00107626001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 70 | 2.2e-22 | 23 | 69 | 5 | 51 |
SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+s + ++++kR+ +++KKA ELS+LC++ev+vi+++s+g+l+++++
GSBRNA2T00107626001 23 TSSLKATSLAKRQVTVFKKARELSILCGIEVCVIYYGSDGELKTWPK 69
578899***************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MASSSSFLPS SSSLVRQNHF QKTSSLKATS LAKRQVTVFK KARELSILCG IEVCVIYYGS 60 DGELKTWPKD REKVKDMARR YSQLSDMKRR KGQDDLDKFL KKINKEDSKK KKVKVESSCK 120 YLDWDPRFDN CSVEQLTELI QSLEHSETKL QHRLRCAVES QRQRNMYYTT MAGQEQMNHL 180 QQHSDQVSMD QYNHGTGTLP QLPVSTSAFN QSQSLAPLPN SLTIHHNPNM ESYSRLLGVQ 240 ETGMNELLSM TMLPYNNINT NNVNVFPNQF HQNSYNMEDY SGFLGGINNV SSEDYSGLLW 300 TQGTGISGLQ NMDMFGYNNN NNNAYGFSNQ LVQYQGQRAP PGFQYMDRST QNIRPL*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |