|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSBRNA2T00090011001 |
Common Name | GSBRNA2T00090011001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
AP2 |
Protein Properties |
Length: 455aa MW: 49308.8 Da PI: 6.9514 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00090011001 | genome | Genoscope | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 138 | 187 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
GSBRNA2T00090011001 138 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 187
78*******************......55************************997 PP
|
2 | AP2 | 39.8 | 1.1e-12 | 230 | 276 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+
GSBRNA2T00090011001 230 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEVEAARAYDKAAI 276
89********.7******5553..2.26**********99*********97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MLDLNLDADS PESTQYGDSY ADRKTSDGSG NRSETSTSSV INADADEDSC STRAFTLNFD 60 ILKVGSSGGG GGGDESTAVT KEFFPVAGDC GHLRGSSSRG WIDLSFDGSS QGEANLVAPA 120 PAPAPVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR 180 AAIKFRGVDA DINFTLGDYE EDMKQVQNLS KEEFVHILRR QSTGFSRGSS KYRGVTLHKC 240 GRWEARMGQF LGKKYVYLGL FDSEVEAARA YDKAAISSNG REAVTNFELS SYQNETNSET 300 NNQGGHDKLD LSLGMSLSPG NASKQNGRLF HYPSNTYETQ RGVSLTIGNE FMGKPVNAPL 360 PYGSSDHRAY WNGYNNPVEG RATEKRSEAE GGGMVSNWGW QGPGQTSAMR PQPPGAQPQL 420 FSVAAASSGF SNFRQQPPND NASASSLGYF YPQP*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |