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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00067672001 |
Common Name | GSBRNA2T00067672001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
CO-like |
Protein Properties |
Length: 349aa MW: 38995.2 Da PI: 6.593 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00067672001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 28.6 | 2.9e-09 | 13 | 56 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+ + +k+++++C ++ +lC++C + H+ H++v
GSBRNA2T00067672001 13 ARACDSCVKKRARWYCAADDAFLCQSCDTLVHSAnplarrHERV 56
578*****************************657888888876 PP
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2 | CCT | 68.4 | 1.9e-23 | 290 | 333 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
GSBRNA2T00067672001 290 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 333
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MKNLANAVGA KTARACDSCV KKRARWYCAA DDAFLCQSCD TLVHSANPLA RRHERVRLKS 60 ASPVATKYSS HNHSASCPPL EAATWHQGFT RKPRTPRGSG KKNNLSIFHD LVPEISAEDQ 120 TDSYEIEEQL ICQVPVLDPM VAEQFLNDVV EPKIEFPMIT IDDQEDEDNA ESCLNGFFPT 180 DMELEEFAAD VEILLAMNMG ICCEAIKNAD CIKVEEEEQK NVLMLSLNYE SVISTWGGQG 240 QPWLSREPPE RDIDISDKPV VSMEINGGES HHKHYVGGCL PSSGFGDGGR EARVSRYREK 300 RRTRLFSKKI RYEVRKLNAE KRPRMKGRFV KRASLALSAA SSPLGVNY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 300 | 316 | RRTRLFSKKIRYEVRKL |