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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00064764001 |
Common Name | GSBRNA2T00064764001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 277aa MW: 31180.5 Da PI: 9.9879 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00064764001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 75.9 | 3.1e-24 | 6 | 55 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s + +++s+R+++i+KKA+ELS+LC++ v+vi+++++g+l+++++
GSBRNA2T00064764001 6 SSSSNSLAATSLSNRLKTIFKKASELSILCQVAVSVIYYGPNGELKTWPK 55
78999*******************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MRASSSSSSN SLAATSLSNR LKTIFKKASE LSILCQVAVS VIYYGPNGEL KTWPKEKEVV 60 KDMALRYKAA TKRKKSSNLQ DFLEGKIRVL EAKKQRNTNL VHQTVQPSNP SKCSLYLYNH 120 DDATLSQLPL SASHSNQLIN YQNHLRMQQQ RLYDPCVSNT QGHPALLSVQ ESRLKNQLMQ 180 QQEAYGSHHN VRMMNNTTNS KVLGHPCPLK TIPKEFSFDL QKNPNDDMVG RPKYSQDFPN 240 LFLAYADIPQ LQTSSLPSIH QTIPNINLIP DNSRCP*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |