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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00062664001 |
Common Name | GSBRNA2T00062664001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 306aa MW: 35128.6 Da PI: 6.1582 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00062664001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 60.8 | 1.6e-19 | 9 | 57 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+ ++vi ++++g+l++++
GSBRNA2T00062664001 9 SSSSYSLAATSLNSRLLTIFKKAQELTTLCDIGACVIHYGPDGELKTWP 57
799*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MRPPRPSSSS SSYSLAATSL NSRLLTIFKK AQELTTLCDI GACVIHYGPD GELKTWPENR 60 DIVRDLALRY IQLDQAKRRK KSVNLHEFLN KNKDKKTMLN KFKKRNVEEL KYPISDHYSP 120 DQISQLIQSL ELSYSKLQER RRFLAEKANM EDRQPSLNPS HFTKYPEESC VYDQNNFQHL 180 CVSDYSALQE PGLHNYQLMP YVGYYQNMCM GNNFQVPCVS DYSLFPPELQ ETVSNYGMNQ 240 LMQNMCMGDT TNSCNVLHPC LSDDLCFDFQ DPYGGNPSFS QDFPDISSSY VYENTLLQGC 300 TQPSL*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |