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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00055802001 |
Common Name | GSBRNA2T00055802001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 290aa MW: 32902.4 Da PI: 10.1225 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00055802001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 75.8 | 3.3e-24 | 6 | 55 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s + +++s+R+++i+KKA+ELS+LC++ v+vi+++++g+l+++++
GSBRNA2T00055802001 6 SSSSNSLAATSLSNRLKTIFKKASELSILCQVAVSVIYYGPNGELKTWPK 55
78999*******************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MRASSSSSSN SLAATSLSNR LKTIFKKASE LSILCQVAVS VIYYGPNGEL KTWPKEKEVV 60 KDMALRYKAA TKRKKSSNLR TLSTMEERIR VLEAKKQKNT NLVHQNLTQQ RHHQHQTVQP 120 LNPSQYSLYL FNRDDATLSQ LPLSASHSKQ LISYQNQLRM QQQRLYDPCV SNTQGHPALL 180 TVQESWLKNQ LMQQQEPYGS HHNMRTMNNT TNSKVLGHPC PLNTIPKEFS FDLQKNPNDD 240 MVGRPKFSQD FPNLCLAYAD SPQLQTSSLP SIHQTIPNIN LIPDNSRCL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 72 | 97 | RKKSSNLRTLSTMEERIRVLEAKKQK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |