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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSBRNA2T00046305001 |
Common Name | GSBRNA2T00046305001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 359aa MW: 41155.9 Da PI: 6.2875 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSBRNA2T00046305001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 61.9 | 7.1e-20 | 18 | 66 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g+l++++
GSBRNA2T00046305001 18 SSSSYSFAATSLNSRLLTIFKKAQELTTLCDIEACVIHYGPDGELKTWP 66
7899********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MRSPRPSSCS KYSSASSSSS SYSFAATSLN SRLLTIFKKA QELTTLCDIE ACVIHYGPDG 60 ELKTWPEDRD KVRDLALRYI QLDEAKRRKK NVNLHEFLNK MEDKKTMLQK FKKRAKKNVE 120 ELKYPISDHY SPGQINQLIH SLELSYSKLQ ERRRFLAAKA NLEDRQHSFI PSHFTQESVL 180 KNQELYVNDK NNNSFQHLCV SDYSAVQESA LRYHSMLYGG TYDQNMMCMG NSNNVQHPWL 240 SNAHPTELQE PNQLMQRELN YGFDQNMCMS DTTNSFSVVD PCLPNMLPDD FCFDFQDPYG 300 GNMVGNPSFS QDFFPDMSSS YVYGSRLLQE STLPSLSSSN ITNENSEIPS NLPDDHRE*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |