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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM6G287292_P01 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
BES1 |
Protein Properties |
Length: 256aa MW: 27005.5 Da PI: 10.3186 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM6G287292_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 207.7 | 3.2e-64 | 13 | 155 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92
g++gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyr+gskp+e+++ +g+s s sp+s
GRMZM6G287292_P01 13 GAGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRQGSKPMERMDPIGCSVSPSPCS 104
689***************************************************************************************** PP
DUF822 93 slqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlsl 145
s+q +sp++sy+asp+sssfps +s+ +++ ++ + +lp+l++ s+
GRMZM6G287292_P01 105 SYQ--------PSPRASYNASPTSSSFPSGASSPFLPPNEMpngidgNPILPWLKTFSN 155
***........999999999999999999999998887766777887888888888776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MASGGGGGLG AAGAGGRMPT WRERENNKRR ERRRRAIAAK IFAGLRAHGG YKLPKHCDNN 60 EVLKALCNEA GWVVEPDGTT YRQGSKPMER MDPIGCSVSP SPCSSYQPSP RASYNASPTS 120 SSFPSGASSP FLPPNEMPNG IDGNPILPWL KTFSNGTPSK KHPLLPPLLI HGGSISAPVT 180 PPLSSPSART PRMKTDWDEA AVQPPWHGAS SPTIVNSTPP SPGRPIAPDP AWLAGIQISS 240 TSPNSPTFSL VSTNPF
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 2e-23 | 17 | 88 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-23 | 17 | 88 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-23 | 17 | 88 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-23 | 17 | 88 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.13340 | 0.0 | ear| endosperm| leaf| meristem| ovary| shoot| tassel |
Functional Description ? help
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Source |
Description |
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT036557 | 0.0 | BT036557.1 Zea mays full-length cDNA clone ZM_BFb0123H10 mRNA, complete cds. |
GenBank | EU968491 | 0.0 | EU968491.1 Zea mays clone 321364 brassinazole-resistant 1 protein mRNA, complete cds. |