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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM5G868875_P01 |
Common Name | LOC103625831 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GeBP |
Protein Properties |
Length: 257aa MW: 28094.5 Da PI: 9.9153 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM5G868875_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 30.6 | 9.1e-10 | 68 | 159 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95
r w +Dei++L + + ++k+g p +d a + s+ + s q++ ++ L++++ + v + k+g p +k++d i+ lsk i
GRMZM5G868875_P01 68 VRSWPASDEIAILETVASHRQKHGRLPLADDLAAAVRGRLSVGDRLSAAQITRRLCALRNRYDNTVIRLKRGTIP--AKDSDVTIYRLSKLI 157
689*********************999987666666677777789***********************8888775..689999********* PP
DUF573 96 Wg 97
W+
GRMZM5G868875_P01 158 WE 159
*7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MTSEEHPSSA SSDGSTTIGS DEHLDPSPSP STSFDSPPES DDSAASSLLS DGSSESEPII 60 FKKPRPPVRS WPASDEIAIL ETVASHRQKH GRLPLADDLA AAVRGRLSVG DRLSAAQITR 120 RLCALRNRYD NTVIRLKRGT IPAKDSDVTI YRLSKLIWEG TRRGRIEKKT RVPDARNDPR 180 GFDDLAELYP CLSAEVEAIG ARCGYGALKR AFGRIGDDTA ARLEAKLKRQ RMAETRASGK 240 LDRLRSRVAN ALQGFNK
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.28152 | 0.0 | cell culture| endosperm| meristem| ovary| shoot |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT039065 | 0.0 | BT039065.1 Zea mays full-length cDNA clone ZM_BFb0368A17 mRNA, complete cds. |
GenBank | EU970726 | 0.0 | EU970726.1 Zea mays clone 349552 hypothetical protein mRNA, complete cds. |