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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM5G849600_P01 |
Common Name | bHLH94, LOC100279537 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
bHLH |
Protein Properties |
Length: 426aa MW: 44478.5 Da PI: 5.4576 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM5G849600_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.7 | 8.4e-13 | 232 | 277 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h + Er+RR+++N++f++Lr+llP++ K +K ++L+ A Y+k L+
GRMZM5G849600_P01 232 HMISERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTNAASYLKALE 277
7789*********************9.....699**************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 426 aa
Download sequence Send
to blast |
MDEVWCGLDL QLQADGIHAG PDLHGHDHDP FWSALAECAA SFLASDADDT GGLVASAGDV 60 VHAKADGMDT SSFFADNDHH GLTQRRDEQQ QQQPVHSSSS LSSKRSLSID SGGSSSSTLI 120 PPLDGAAAAA FSPAPPQPQD PFAGDDEAIM LAMMAVISSA SPSSSESSSP PHRAAGAGAV 180 QPRVHLHGGD DSAGHVTVRT SSLAVAPTSA AARQQDDACM AAGSNNSSQV YHMISERKRR 240 EKLNDSFHTL RSLLPPCSKK DKTTVLTNAA SYLKALEAQV SELEEKNAKL ERHVPRDDGG 300 GGTAATAAAV AHRRARVHVA RAAPGEPQVS VTVMVMVECD IVDLVLRVLE CLRWMGGVVS 360 VLSVDADTYS PQAMLKALAN IKLHIVDGDC WNEALFHEAM TKAVHDATSP SSSPSCAAVA 420 PLVAAA
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 235 | 240 | ERKRRE |
2 | 236 | 241 | RKRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT054416 | 0.0 | BT054416.1 Zea mays full-length cDNA clone ZM_BFc0045O17 mRNA, complete cds. |