 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GRMZM5G823157_P01 |
| Common Name | LOC103627587 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
| Family |
WRKY |
| Protein Properties |
Length: 484aa MW: 50805.4 Da PI: 6.0964 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM5G823157_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.3 | 1e-30 | 222 | 280 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
GRMZM5G823157_P01 222 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPSLLVITYNSEHNHP 280
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MCDYFLQRMD QGDHHHHHQA GDLTDVVRAG GAMHQAAVAE LPSADTGWQL PAEPAAGACL 60
FPPPQPSSSD CDGFADAFAG LPDPFASDFR TSSSSGVGLC PADDFFDFEA PAAAAAGGGA 120
RRGGGVLAGA QMPALSPREI RPYPVTMGGD TVKIGAPTMM PGLAVGPPCC AFDAVAGMQM 180
PSPHAHGGGI KRRKNQARKV VCIPAPAPSS AGGRTTGEVV PSDLWAWRKY GQKPIKGSPY 240
PRGYYRCSSS KGCPARKQVE RSRTDPSLLV ITYNSEHNHP WPTQRNALAG STRSHHAKSG 300
KNSSSHSLQK PNLKAEPEHH QASEAVPSYA TTATAATTTS TTTTATTSTT SNSTPPETVA 360
AVKEEAMVGS EVEKGTDHDA SVLLDHGDLM QQMFSQSYYR PKIPEASGGH HADDFFADLA 420
ELESDPMSLI FPGGDPGKKG RMSSESLGMG TDPLFNMLDW GASATDVAAT SAGSSFEQDE 480
EWLA
|
