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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G471600_P01 |
Common Name | LOC107548110, ZEAMMB73_914271 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 299aa MW: 30828.5 Da PI: 7.4146 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G471600_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 97.4 | 1e-30 | 87 | 140 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv+av+qL G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
GRMZM2G471600_P01 87 RPRLVWTPQLHKRFVDAVAQL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 140
59*******************.********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MREEEEPSWF ARGEEQEQQL PRPDELMPLT QTLITPDLAV AFDITTHGAG GAGPVPDING 60 GGASSAAGSS GGGGGGGGDE PARTLKRPRL VWTPQLHKRF VDAVAQLGIK NAVPKTIMQL 120 MSVDGLTREN VASHLQKYRL YLKRMQGLGG GGGGGSHSSG SGSATDAATE HLFATGPVPF 180 LPPAHRAPAA DTYPPFSPMG SGAAHHHHRA PQIGHFHHPA ARPLAHYAAA AGPGFDHGFL 240 SRVAPPGMHH HRMASAAAGM GMGMIAPSSF ADEMDRGAGG SGGGGGRREL TLFPTSGDH
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, stems, petioles, filaments, stigma, pedicels, sepals, anthers, petals, and siliques. {ECO:0000269|PubMed:20331973}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT085448 | 0.0 | BT085448.2 Zea mays full-length cDNA clone ZM_BFc0014E09 mRNA, complete cds. |
GenBank | BT085899 | 0.0 | BT085899.2 Zea mays full-length cDNA clone ZM_BFc0078O07 mRNA, complete cds. |