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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G465835_P01 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
NAC |
Protein Properties |
Length: 272aa MW: 30229.6 Da PI: 7.1793 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G465835_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 131.3 | 7e-41 | 5 | 141 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgy 82
+pGfrF Pt+eel+++yL++k++g++ ++e+vi+ +d+++++PwdL + +++++e+ w++F++r++++a+g r++r+t sgy
GRMZM2G465835_P01 5 APGFRFYPTEEELICFYLRNKLSGTRrADIERVIPVADVCTLDPWDLISgtfirqahrgACSGNEEPWFYFCPRQEREARGGRPSRTTPSGY 96
69*********************9987888889**************74578887776645557889************************* PP
NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
Wka g+ v++++g+ +g+kkt+vfy+grap g kt+W ++ey+
GRMZM2G465835_P01 97 WKAAGTPGLVYAADGRPIGTKKTMVFYRGRAPAGAKTKWKLNEYK 141
********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MAEFAPGFRF YPTEEELICF YLRNKLSGTR RADIERVIPV ADVCTLDPWD LISGTFIRQA 60 HRGACSGNEE PWFYFCPRQE REARGGRPSR TTPSGYWKAA GTPGLVYAAD GRPIGTKKTM 120 VFYRGRAPAG AKTKWKLNEY KAFEDDDATA AVAAPAPPSH ALQTWSQYSL CRLYTKSGCL 180 RQFDRRRSST AAATGGGNEN KPPAPSTALP DGDQTGQKRK RAAPTDDTSS SYEDGDEDVS 240 TQQRLRLAQR GADDEGVKDM TDWWSEFLDD CI
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-28 | 6 | 176 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-28 | 6 | 176 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-28 | 6 | 176 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-28 | 6 | 176 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 5e-28 | 6 | 176 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 5e-28 | 6 | 176 | 19 | 165 | NAC domain-containing protein 19 |
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