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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GRMZM2G454449_P01 |
| Common Name | ZEAMMB73_437672 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
| Family |
G2-like |
| Protein Properties |
Length: 253aa MW: 28049.3 Da PI: 8.4883 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G454449_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 94.9 | 6.4e-30 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+eLH++Fveave LGG+++AtPk+il+lm+ kg++++h+kSHLQ+YR
GRMZM2G454449_P01 18 PRMRWTEELHRQFVEAVECLGGQDEATPKRILQLMGAKGVSISHIKSHLQMYRA 71
8****************************************************6 PP
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| Plant Ontology ? help Back to Top |
| PO Term |
PO Category |
PO Description |
| PO:0009001 | anatomy | fruit |
| PO:0009089 | anatomy | endosperm |
| PO:0001094 | developmental stage | plant embryo coleoptilar stage |
| PO:0001095 | developmental stage | plant embryo true leaf formation stage |
| PO:0001180 | developmental stage | plant proembryo stage |
| PO:0007001 | developmental stage | early whole plant fruit ripening stage |
| PO:0007031 | developmental stage | mid whole plant fruit ripening stage |
| PO:0007032 | developmental stage | whole plant fruit formation stage up to 10% |
| PO:0007633 | developmental stage | endosperm development stage |
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MRGFERKGVR QYNRSEVPRM RWTEELHRQF VEAVECLGGQ DEATPKRILQ LMGAKGVSIS 60
HIKSHLQMYR ASISSSSSTH HQPSLQKSTS TAASNNKRVF FTREDCASQE GNAPASDKNI 120
YTTTVRGCGQ YSSPYQIRPS LQQVFRCWEQ KRGRVAWNSD VLTTEKGVII RPSHTRKHET 180
QQHTGCDLTL SIGLWEDASS SDDADGSSSI SEELLPAPAA GGARRVAAVV KEEEESKPAA 240
LNLDLTISSS WLA
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU956037 | 1e-136 | EU956037.1 Zea mays clone 1555999 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds. |
