PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 215aa MW: 23598.3 Da PI: 11.0537

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G425920_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.3	2.6e-11	110	169	2	61
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ke r +r+ +N ++A+ R+RKka++ eLe k+k Le N +L +++++l++e +l++ GRMZM2G425920_P01 110 KEQNRLKRLLRNHVSAQQARERKKAYLTELEAKAKGLELRNAELEQRVSTLQNENNTLRQ 169 78899*************************************************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-10	109	173	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-9	110	169	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.162	111	171	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.6E-15	114	171	No hit	No description
SuperFamily	SSF57959	6.0E-11	114	170	No hit	No description
CDD	cd14704	4.09E-16	114	164	No hit	No description
PROSITE pattern	PS00036	0	116	131	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence Send to blast
MSSAREEEKK IDAEMRRRRS SRRRRAPRAR SPPAASAPPA PLATTSRKEG RRATRRYGGV 60 PEMGGASASA SSGAGADERP KGEDGKQGQV AAGAQPPAGG KKRGRTAGDK EQNRLKRLLR 120 NHVSAQQARE RKKAYLTELE AKAKGLELRN AELEQRVSTL QNENNTLRQV IDVSGKEFKF 180 TWASGRGELC DIYEERQSGE DGNGLLLECG STWRK

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Zm.24190	0.0	cell culture\| meristem

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G425920

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269\|PubMed:15178762}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G425920_P01

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT068393	0.0	BT068393.1 Zea mays full-length cDNA clone ZM_BFb0155D12 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020400780.1	1e-152	putative bZIP transcription factor superfamily protein isoform X1
Swissprot	Q9SM50	1e-32	HY5_SOLLC; Transcription factor HY5
TrEMBL	A0A1D6J7Y3	1e-115	A0A1D6J7Y3_MAIZE; Transcription factor HY5-like
TrEMBL	C0PJC4	1e-115	C0PJC4_MAIZE; Uncharacterized protein
TrEMBL	K4JFH4	1e-115	K4JFH4_MAIZE; BZIP-type transcription factor (Fragment)
STRING	GRMZM2G425920_P01	1e-152	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1408	38	111
Representative plant	OGRP2081	17	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11260.1	1e-25	bZIP family protein

Link Out ? help Back to Top
Phytozome	GRMZM2G425920_P01

Publications ? help Back to Top
Wang F, et al. Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato. Plant Physiol., 2018. 176(2): p. 1311-1326 [PMID:29146776] Liu CC, et al. The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato. Plant Cell Environ., 2018. 41(8): p. 1762-1775 [PMID:29566255]