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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G425366_P01 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
GRAS |
Protein Properties |
Length: 541aa MW: 60489.3 Da PI: 5.2866 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G425366_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 69.9 | 4.9e-22 | 219 | 341 | 2 | 124 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
++lL+ cA+av+++d ++a++lL++++++as++gd++qRla++f+++L+arl++++s+l + +s+ +++e l+a++l+ ++ +
GRMZM2G425366_P01 219 RSLLILCAHAVAANDGARARELLKQINQHASETGDATQRLAQCFARGLEARLLGTGSQLWQLQLASDR--LSTAEFLKAHNLYMAACGFNMA 308
789***************************************************99999864433333..35999************99888 PP
GRAS 94 shltaNqaIleavege..ervHiiDfdisqGlQ 124
+I++a++ + + +Hi+D+++ G+Q
GRMZM2G425366_P01 309 VIGFSTMTIMQAMAMAgrRSLHIVDYGMRFGFQ 341
888888888887665544999**********99 PP
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2 | GRAS | 134.3 | 1.4e-41 | 342 | 532 | 184 | 373 |
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
k++e + e+L+ +p+E+l+Vn +++ +l+desv ++ +rd+vL v++++P+v++ + + + n+ s+l rf eal yy+a+fd ++a
GRMZM2G425366_P01 342 KKWELVCNEDLDRRPDEVLVVNDHFNFSTLMDESVFFDNpsPRDTVLLNVRKMRPDVFIQSILN-NSNGCSYLSRFREALFYYTAMFDIFDA 432
578888999*************************98877779***************9877655.66999********************** PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
++pres+ r+++E+ l+gr++ nvvaceg + er e++++W++r ++aG++++pl+ ++++ k +r ++ + + + e+ ++l++gW++r
GRMZM2G425366_P01 433 TMPRESRSRVVLEQGLFGRSALNVVACEGIDLLERPERYRQWQARNQRAGLRQLPLQPTIVSILKEEVRSCHHRDFLICEDGKWLLQGWMGR 524
************************************************************************999***************** PP
GRAS 366 pLvsvSaW 373
L++ S W
GRMZM2G425366_P01 525 ILFAQSTW 532
******** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 541 aa
Download sequence Send
to blast |
MATSPEQFFV KDVSSTQQGG GCHHHAVPSD EDMMLPYISR MLMEDDDDAA DDNKLSHHPA 60 LLQVEEPFAQ ILSSPSLGGI SEDVLQGGGS DGRTPDYSSS SRSRCASAAG AFLELEDDVL 120 PGDDSGFMVG RESSVLSKKR YASRDDGSLE EEVVTRRSKA DKDTCAHDML EDMMLSGHET 180 YIRDMEKLRI AMANEKSRSN GKGGGGSKKA SFCNVVDIRS LLILCAHAVA ANDGARAREL 240 LKQINQHASE TGDATQRLAQ CFARGLEARL LGTGSQLWQL QLASDRLSTA EFLKAHNLYM 300 AACGFNMAVI GFSTMTIMQA MAMAGRRSLH IVDYGMRFGF QKKWELVCNE DLDRRPDEVL 360 VVNDHFNFST LMDESVFFDN PSPRDTVLLN VRKMRPDVFI QSILNNSNGC SYLSRFREAL 420 FYYTAMFDIF DATMPRESRS RVVLEQGLFG RSALNVVACE GIDLLERPER YRQWQARNQR 480 AGLRQLPLQP TIVSILKEEV RSCHHRDFLI CEDGKWLLQG WMGRILFAQS TWVAEDSSYS 540 E
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