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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G424261_P01 |
Common Name | ZEAMMB73_459327 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
TCP |
Protein Properties |
Length: 162aa MW: 17274.4 Da PI: 6.0784 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G424261_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 36.6 | 1.5e-11 | 100 | 137 | 36 | 66 |
TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgt.......s 66
qd+LGfdk+skt++WLl q+kp i+ l++ +
GRMZM2G424261_P01 100 QDRLGFDKASKTLNWLLAQSKPPIDCLVDAadqvavvT 137
9************************9999844444430 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 162 aa
Download sequence Send
to blast |
MPPHLRHAFS AEGVGAGASS PYSSDISLDT DQRSTSTRVF HSIHAPSFSL SSDVPFVFAA 60 FALFFLPNLL PLPTVAAASR PTLVNADVYV FVVSFSDNEQ DRLGFDKASK TLNWLLAQSK 120 PPIDCLVDAA DQVAVVTGGR PTLVKGREQG SNSSTCCLTD SR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU961498 | 2e-79 | EU961498.1 Zea mays clone 235951 teosinte branched1 protein mRNA, complete cds. |
GenBank | KJ727762 | 2e-79 | KJ727762.1 Zea mays clone pUT5707 TCP transcription factor (TCP11) mRNA, partial cds. |