|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G415229_P01 |
Common Name | LOC100384464, THX3, ZEAMMB73_306264 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
Trihelix |
Protein Properties |
Length: 271aa MW: 31896.9 Da PI: 9.2096 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G415229_P01 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 77 | 2.9e-24 | 18 | 100 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W qe+++Li arreme++ + ++++k+ We+v++++rerg++r+++qCk+kw+nl +ryk ++++ ++ ++cp+fd+l+
GRMZM2G415229_P01 18 QWGVQETRELIVARREMEREAVAaRRSAKTMWEAVAARLRERGYRRTAEQCKCKWKNLVNRYKGKETSDPEN----GRQCPFFDELH 100
7*****************9877526899************************************99999974....678******98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MMEAGGAGAG GRDERVPQWG VQETRELIVA RREMEREAVA ARRSAKTMWE AVAARLRERG 60 YRRTAEQCKC KWKNLVNRYK GKETSDPENG RQCPFFDELH AVFTDRARDM QRQLLESESG 120 ASVKRKLKQP GGDRSSGLSD DEGNGGEESD EEKPLPSRKR KADDKKQQHQ RMSGKSRAGF 180 SSIHELLQDF LVQQQHIDVW WREMMERRAQ ERIVFEQQWR QTMQKLEQER LLLEHSWMER 240 EEQRRMREET RAEKRDALLT ALLNKLLQED L
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT070202 | 0.0 | BT070202.1 Zea mays full-length cDNA clone ZM_BFc0184N21 mRNA, complete cds. |