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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G404769_P02 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
E2F/DP |
Protein Properties |
Length: 453aa MW: 49968 Da PI: 9.9073 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G404769_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 49.6 | 6.6e-16 | 280 | 311 | 40 | 71 |
E2F_TDP 40 knkrRRiYDilNVLealnliekkekneirwkg 71
++RRiYDi+NVLe+++liekk kn+irwkg
GRMZM2G404769_P02 280 MVQKRRIYDITNVLEGIGLIEKKLKNNIRWKG 311
359***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0016787 | Molecular Function | hydrolase activity |
Sequence ? help Back to Top |
Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MNRKCLYSRL GTTTLSLRTM KAQISNGRGG CLALKLAEHE GRGGNLSKLL PLFLTEQSLH 60 EAKADPAKAT ANGVPNGTGH SYSGTVPSQQ NSALTPDGNY RAPLLGGVPS AGYLDTTYGY 120 DSTGAQFAWY DGSAYANGQQ RTTTTNRFPS SSFSGNGSSA RYQNKSSTTQ QMGMQNRRPT 180 TTSAAPTYPN RMYPSPRPYT QYGNSVKTGL PYGSNGYDSR INGRCGLGMD NRYRPRACSG 240 YYGYGNESQD GTIELNRGPR SGRFKNQKLY GHTVTIDPVM VQKRRIYDIT NVLEGIGLIE 300 KKLKNNIRWK GVDDSRPGEF SDDMSILQMG RVREKLDIDF VISTGDNFYK NGLKGVRDQA 360 FKESFMDIYI AQSLQKPWYS VLGNHDYMGN ALAQLSPVLR KIDDRFICMR SSSLTQNLWT 420 SSLSTPLHSN WSIGLTLASI VMTGEGWRLE AST
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.83406 | 0.0 | ear| embryo| endosperm| glume| leaf| meristem| ovary| pericarp| root| shoot| tassel |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT066390 | 0.0 | BT066390.1 Zea mays full-length cDNA clone ZM_BFc0033N20 mRNA, complete cds. |