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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G398055_P01 |
Common Name | LOC107305672, Zm.148525 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 312aa MW: 31420 Da PI: 7.741 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G398055_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 96.6 | 1.8e-30 | 96 | 149 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
GRMZM2G398055_P01 96 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 149
59*******************.********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MREEEEASWF ARGEEQQLLR PDELMPLTQT LITPHLAVAF DITTHGAGGT GAAGGAGAGP 60 GAGGPDINGG GASSAAGSSG GGGGGGGDEP ARTLKRPRLV WTPQLHKRFV DAVAHLGIKN 120 AVPKTIMQLM SVDGLTRENV ASHLQKYRLY LKRMQGLGGG GGGGGGGGAG GSHSSGSGTD 180 AATEHLFATG PVPFLPPGHR APAAADSYPP FSPMGGAHHH QHHQIGHFHH PATRPLAHYG 240 GAAVGGFDHG FLSRVGPPAG PPGMHHRMVG GGAGMGMMAP ASFADEMDLG SRGGGGSGSR 300 RELTLFPTSG DH
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, stems, petioles, filaments, stigma, pedicels, sepals, anthers, petals, and siliques. {ECO:0000269|PubMed:20331973}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT086588 | 0.0 | BT086588.1 Zea mays full-length cDNA clone ZM_BFc0188H07 mRNA, complete cds. |