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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G348238_P01 |
Common Name | LOC107522107, Zm.30973 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 499aa MW: 52172 Da PI: 6.1737 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G348238_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 274 | 329 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a++ LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
GRMZM2G348238_P01 274 KARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 329
68****************************************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009266 | Biological Process | response to temperature stimulus |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0010452 | Biological Process | histone H3-K36 methylation |
GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 499 aa
Download sequence Send
to blast |
MASSPSDLTL DYKPNGNGAA YAVTTPKPPQ ETLVVDGHHH HHHLTAAEQT TQKLREFLAR 60 LEEERLKIDA FKRELPLCMQ LLNHAMESYR QQLEAYQMGS LQGAPARPLV LEEFMPLKNI 120 GIDAAADKMG NPTSEKASWM ESAQLWNGPA ATADVAARGP QTPKESAECA HGAAGAGHGQ 180 RNGGGGGGAF LPFAKDKTAS AAEGAALPEL ALAPADKDAA DADRKPYLDA AAGSNNGGVL 240 GSRRDAVQSG VVNVKPAPNA PEGQQAAPPQ THRKARRCWS PELHRRFVNA LQILGGAQVA 300 TPKQIRELMK VDGLTNDEVK SHLQKYRLHT RRPMPAPPAP ATAAPQLVVL GGIWVPPEYA 360 SQAAGQAIYG AHPATQPHYT AAAAQEYYPS PAAVHHLQHH PAAAAMVHRA AAAPPPPQQA 420 AYSKAAAMAG SPPGSEGRGS AGGGSIGGGG GRERSESIEE EGEVEEREED DEDDDDDMTA 480 NKADGEGAAA GAGVGAAMY
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-14 | 274 | 327 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may play a role in regulatory networks controlling development and metabolism. {ECO:0000250|UniProtKB:Q6Z869}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT086572 | 0.0 | BT086572.2 Zea mays full-length cDNA clone ZM_BFc0184N23 mRNA, complete cds. |