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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G317160_P01 |
Common Name | EREB26, LOC100384463 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
AP2 |
Protein Properties |
Length: 428aa MW: 46321.9 Da PI: 8.0397 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G317160_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.4 | 4e-14 | 147 | 206 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g
GRMZM2G317160_P01 147 SIYRGVTRHRWTGRYEAHLWDnTCRkEGqkRKgRQVYLGGYDKEDKAARAYDIAALKYWG 206
57*******************554454475337**********99************987 PP
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2 | AP2 | 47.7 | 3.7e-15 | 249 | 301 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
s y+GV+ +++ grW A+I + +k +lg+f t++eAa+a++ a++k++ge
GRMZM2G317160_P01 249 SIYRGVTKHHQHGRWQARIGRVAG---NKDLYLGTFATEQEAAEAYDIAALKFRGE 301
57****************988532...5**********99**************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MSPPTNGAIS LAYAPSMMLG AGALTNPPLL PFDGFTDEDF LASADAALLG EAGTDQTLLL 60 LPSCPGANCC GGSSSDQGLG ALACEVTTAG SFSLLGQPAP GQVSWEVTTA VAADRNTFSR 120 ARDPAPSPPP SPALPLVQTT SQSQRTSIYR GVTRHRWTGR YEAHLWDNTC RKEGQKRKGR 180 QVYLGGYDKE DKAARAYDIA ALKYWGDNAT TNFPRENYIR EIQDMQNMNR RDVVASLRRK 240 SSGFSRGASI YRGVTKHHQH GRWQARIGRV AGNKDLYLGT FATEQEAAEA YDIAALKFRG 300 ENAVTNFEPS RYNLLAIAQR DIPILGRKLI QKPAPEAEDQ AALSARSFSQ SQQSSNSLPP 360 YFLTNLLQPL PSQHSLAQAL PSYNNLGFGE PSLYWPCPCG DPGEQKVQLG SKLEIVDGLV 420 QLANSAAN
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT070198 | 0.0 | BT070198.1 Zea mays full-length cDNA clone ZM_BFc0189L07 mRNA, complete cds. |