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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G315506_P01 |
Common Name | LOC100502477, ZEAMMB73_797016 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 357aa MW: 37640.6 Da PI: 8.4392 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G315506_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 91.3 | 8.6e-29 | 150 | 199 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ
GRMZM2G315506_P01 150 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 199
9************************************************* PP
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Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MELFPSQPDL SLQIGLPARA TSHHHGAALS ARLLAAAAGG SVGGGNGVPG NPAAAMAPSL 60 QVPIPIPLQL PLPMPPNAAA MLRPIRGVPL YQHPHTHAVP PTFPPHAAGA GPCFCEPCHV 120 AAGAWRRAGC GFGARVAGLF PPAKRAARAP RMRWTSTLHA RFVHAVELLG GHERATPKSV 180 LELMDVKDLT LAHVKSHLQL VVLASKWKKM YRTVKNTERP AASSDQADGF ESGSSSAGEI 240 CDDDNSSLDL HGTDGRRPES SSAVRHGRLT ACNDHGSSTG AHGGALWNSS SREDWAGFPS 300 DSNTGSMSMH SRSLKDQTMQ SKSLEILSDM NSSCVSETTS CASELNLEFT LGPRIRH
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 3e-14 | 151 | 199 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-14 | 151 | 199 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-14 | 151 | 199 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-14 | 151 | 199 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT088311 | 0.0 | BT088311.1 Zea mays full-length cDNA clone ZM_BFc0129I15 mRNA, complete cds. |