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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G300924_P01 |
Common Name | LOC103653830, ZEAMMB73_874454, Zm.40101 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ERF |
Protein Properties |
Length: 445aa MW: 47986.8 Da PI: 9.6846 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G300924_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 212 | 261 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+g
GRMZM2G300924_P01 212 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRG 261
59******9.**********955...5*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 445 aa
Download sequence Send
to blast |
MEPVGGDGGG GRGRGRGRSW KGKGVSSGSA AGRQLAPVLE DAPAAALLRP LKKIRSPDRR 60 LNRSLSSLSP APPSPDSSSA FNPTPLPSAR QIFLAPEAST AGSPRLLPLL QYSSEFQRPM 120 TPPPPDQQQL QQMISFGSSQ QPRQEFVAAA AATPLFPPQL VAPEVQQQML LRYWSEALNL 180 SPRGFRGGAV PLPPARLYQQ LLLRASSGPP KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG 240 TFDTAEDAAM AYDREAFKLR GDNARLNFPD LFLGKGRVGG SGRTSAAASC SSSAPPTPDD 300 SHMKQAAQQQ QRVRDGEQPC SGEAKPLLPE TETERADNSE PKPNPELQSA DHQGDGTTAM 360 FQPSGGVWGP ADEAWFSAWG PGSSVWDYDM DNAHGLFLQS RFASEATSMD YVPSTPEVPA 420 VGTAVASLSP PPPPPRSPTY MKEKD
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728381 | 0.0 | KJ728381.1 Zea mays clone pUT6664 AP2-EREBP transcription factor (EREB170) gene, partial cds. |