|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G174240_P01 |
Common Name | si946029b02 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
GeBP |
Protein Properties |
Length: 308aa MW: 33398.8 Da PI: 10.9959 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G174240_P01 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 42.8 | 1.5e-13 | 123 | 191 | 3 | 70 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvk 70
+q+ ws++De +lL + + f++++g p d+ +++e +++sis ++ + + Ki+rLK Kf++
GRMZM2G174240_P01 123 AQKHWSDDDEFTLLTAAVAFRDRNGRAPRLpDMAELFESIRESISPHIDQFMVYYKIKRLKSKFQHSAG 191
6899**********************88877*********************************98765 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MSSGRPSEPA MNAGATPAAS SPPRSKKRPS RMGDGNSSPN PSPRGSPARR SELKRRRRTS 60 AESAALALAT VAARASAAGV RSDAGDGAVE RRRRPRTRAE GGDGAIRMLG AAAARVGGGR 120 GAAQKHWSDD DEFTLLTAAV AFRDRNGRAP RLPDMAELFE SIRESISPHI DQFMVYYKIK 180 RLKSKFQHSA GPRDRRLRDL CSVLWGVGVV ASSEDDSDVG ERRTVPDAAA MMPVVTEVLG 240 EYWKTNERAM AGVSLEKGLS LLGKKEGRLI ETKWRQQLDQ EMQSQMRRHD LAKEVCGLLT 300 DAIKGLGP
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC216353 | 0.0 | AC216353.5 Zea mays BAC clone CH201-194K18 from chromosome 5, complete sequence. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT2G01370.1 | 8e-09 | DNA-binding storekeeper protein-related transcriptional regulator |