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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
GRMZM2G174070_P01 |
| Common Name | LOC100279912, NAC57, ZEAMMB73_179217 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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| Family |
NAC |
| Protein Properties |
Length: 687aa MW: 76138.7 Da PI: 6.2411 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G174070_P01 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 182.1 | 1.4e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeel+ +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratksgyWkatgkd+
GRMZM2G174070_P01 6 LPPGFRFHPTDEELIICYLKRKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDR 96
79****************************.99**************95334455777********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+v s ++++vg+kktLv+y+grap+g++tdWvmheyrl
GRMZM2G174070_P01 97 KVNS-HRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133
****.9999***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 687 aa
Download sequence Send
to blast |
MAPVSLPPGF RFHPTDEELI ICYLKRKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK 60
DLEWYFFSPR DRKYPNGSRT NRATKSGYWK ATGKDRKVNS HRRAVGMKKT LVYYRGRAPH 120
GSRTDWVMHE YRLDERECET DTGLQDAYAL CRVFKKTAPG PKIIEHYGAV HHPIEQTQWM 180
GSSVERSPTL DLSSDVRGDD FDSSSFSFPT EAPMDSSMHG GLFGMQMSAP HEDAKWMQFL 240
SEDAFNATNP FFTNPASSSF SCLPSKVDVA LECARLQHRL SLPPLEVEDF PHDVSLDTKA 300
SVLRSSNPNN EVDILQEFLS VASASQELIN GTSSSYAAEM WAGAGTSSTS DTHYVNELSS 360
LFEFGVKAKE EADNFYHMDC IGTSSGFSPK PVRVDEPVRL VEIADMEEFK EEKRRVENLR 420
GVRLHNNDDL GEIPTDCCIT QYPISDTADI SGEAGHLTNP TSAGGLDTAP IFSQSQPDDF 480
AIGFSDDADP NASFDLCERV DVKHGLFVST VGAPKTFFHH VEPSKKVSFH LNNNPVASDD 540
DVSKATTGKS RSPIISVMTT KDSGSSFSVF SKLKALIRDK FLVKKLPSSC QRSLLGSKET 600
AAVSELLQMV VSSLLLTPTE VTGPTTEQEK LARKAMKPGP RRCDGSHAWL LPLPKRSKGI 660
SSMFFSGKWA FLTSALAIRA PGPGCNH
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT055106 | 0.0 | BT055106.1 Zea mays full-length cDNA clone ZM_BFb0347B22 mRNA, complete cds. |
