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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G171569_P01 |
Common Name | EREB64, Zm.13801 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ERF |
Protein Properties |
Length: 307aa MW: 33195.8 Da PI: 10.0591 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G171569_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.5 | 5.3e-21 | 97 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +grW+AeIrdp +r++lg+f+taeeAa+a++aar++++g
GRMZM2G171569_P01 97 RFTGVRRRP-WGRWAAEIRDP-----MlrRRVWLGTFDTAEEAAAAYVAARLRIRG 146
589******.**********9.....445*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MDPSLKEEVM KAVEEARSAS VPRCRVVRII VHDEDATDSS SSEDEDEDEA GERASPHPGS 60 PSASASAGSV KRSRVLLQSA GCGAEEDEEE EEGEGARFTG VRRRPWGRWA AEIRDPMLRR 120 RVWLGTFDTA EEAAAAYVAA RLRIRGPKAS GSNLLPSGAH AAGSLPPPAH RPPLPPRPPP 180 PPQREKQQCP PPPLLPPKKQ QYPPPPLLPP KKQLYPPPLP LPPKKQQHHH PPPPLPTLPP 240 KKRLASPPLL PGSEKQWVIS SPSEPRFVPL PVWALMSGSG KRKKRSGCGG RVPALHTPAA 300 AEETGRA
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Zm.13801 | 0.0 | endosperm| meristem| ovary| shoot| tassel |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT042564 | 1e-125 | BT042564.1 Zea mays full-length cDNA clone ZM_BFb0339C12 mRNA, complete cds. |