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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G166230_P02 |
Common Name | BBR2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
BBR-BPC |
Protein Properties |
Length: 184aa MW: 20263.6 Da PI: 11.0818 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G166230_P02 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 278.6 | 2.9e-85 | 11 | 184 | 126 | 301 |
GAGA_bind 126 lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtG 217
+r ++++ ++ + a+++ ++k+ +kkr + ++pk+ k +k+kk +++ ++ + +++ +r++ +kk++++v+ng++lD +++P+PvCsCtG
GRMZM2G166230_P02 11 TRSNHNIIVTML-AAHPDPDTKPPVKKRWQVRQPKSLKPRKPKK-AAVPPENGALNEHAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTG 100
445555544444.456667777888889****************.667778888888889******************************** PP
GAGA_bind 218 alrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
a++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvtir
GRMZM2G166230_P02 101 APQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLANPIDLKTFWAKHGTNKFVTIR 184
***********************************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MDITMPHTSS TRSNHNIIVT MLAAHPDPDT KPPVKKRWQV RQPKSLKPRK PKKAAVPPEN 60 GALNEHAPRR RGPKKTVGMV INGIELDLAN IPTPVCSCTG APQQCYRWGA GGWQSACCTT 120 SISTYPLPMS TKRRGARIAG RKMSQGAFKK VLEKLAGEGY NLANPIDLKT FWAKHGTNKF 180 VTIR
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000250}. |
UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT064015 | 0.0 | BT064015.1 Zea mays full-length cDNA clone ZM_BFc0131I22 mRNA, complete cds. |