 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G163054_P04 |
Common Name | LOC107546771, Zm.120034 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
WRKY |
Protein Properties |
Length: 195aa MW: 21165.5 Da PI: 8.0698 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G163054_P04 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.4 | 2e-30 | 101 | 159 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYG+K vk+s++pr+YYrC+s+gC vkk+ver+++dp++v++tY g Hnh
GRMZM2G163054_P04 101 LDDGFKWRKYGKKAVKSSPNPRNYYRCSSEGCGVKKRVERDRDDPRYVITTYDGVHNHA 159
59********************************************************6 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0050832 | Biological Process | defense response to fungus |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MAASLGLNPE AVFTSYTSSP PFMSDYVAAS FLPPAVVDST DFSAELDDLH HHLDYSSPAP 60 TLAGARSDRS EKQMIRWCEG GGGEKRLGRI GFRTRSEVEI LDDGFKWRKY GKKAVKSSPN 120 PRNYYRCSSE GCGVKKRVER DRDDPRYVIT TYDGVHNHAS PAAAAIIQYG GGGGFYSPPH 180 SGSPSAASYS GSFVL
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT086427 | 0.0 | BT086427.1 Zea mays full-length cDNA clone ZM_BFc0165H01 mRNA, complete cds. |