PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G156737_P01
Common NameEREB89, LOC103653247, ZEAMMB73_246694, Zm.124606
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 352aa    MW: 37881.3 Da    PI: 7.8217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G156737_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-1976126155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        + ++GVr++  +g+WvAeIr+p   + r +r +lg+fg+a eAa+a++aa+++l+g
  GRMZM2G156737_P01  76 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFGSALEAARAYDAAARALYG 126
                        679****999.**********8...3.35***********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.57477134IPR001471AP2/ERF domain
SMARTSM003802.6E-3277140IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1978134IPR016177DNA-binding domain
PfamPF008472.6E-1378126IPR001471AP2/ERF domain
PRINTSPR003679.6E-97889IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.9E-2878134IPR001471AP2/ERF domain
CDDcd000181.73E-1678134No hitNo description
PRINTSPR003679.6E-9100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010286Biological Processheat acclimation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006354anatomyear floret
PO:0009001anatomyfruit
PO:0009025anatomyvascular leaf
PO:0009074anatomystyle
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007106developmental stageLP.03 three leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MDRLAPPVAV EVPVVHRQQQ QQFVHHSQVH QQQRTHQQQQ HQNGGGSKPG GRKCCPLRRS  60
RKGCMKGKGG PDNQQCPFRG VRQRTWGKWV AEIREPNRGA RLWLGTFGSA LEAARAYDAA  120
ARALYGDCAR LNLQLPPPSA AAGGGPAIVA SPSPDTVAGP AAAAAGGHSR HHQYLQQQQP  180
SMAAPMMMVH SSCCSADASS SNSDSNSNSS SSPVTMAAAA TSPTYTHHQT TFQMPPPPPS  240
SCGVMMAAVQ GCHVDDTTTT TMAMQRHQQM LRELAAAPLH QEADDFEDFM TRLPKAEDFG  300
LQGFQEVPPE VFDEAAGIWD HTAAWSSPTM MIDSAGAQRQ QVVDSSSLFN SR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1370133771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1246060.0embryo
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G156737
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G156737_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276750.0KJ727675.1 Zea mays clone pUT5602 AP2-EREBP transcription factor (EREB89) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008678419.10.0dehydration-responsive element-binding protein 2C
TrEMBLA0A3L6F0Y30.0A0A3L6F0Y3_MAIZE; Dehydration-responsive element-binding protein 2C
TrEMBLK7U2G70.0K7U2G7_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G156737_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55103454
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.12e-30ERF family protein