|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G120151_P01 |
Common Name | LOC100281328, TCP23 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
TCP |
Protein Properties |
Length: 298aa MW: 30902.7 Da PI: 8.3073 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G120151_P01 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 92.8 | 7.1e-29 | 60 | 129 | 3 | 71 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.s 71
g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl +a+ +i++l+ ++++++ +
GRMZM2G120151_P01 60 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLDAAQDEIDKLPPLQFPPQgQ 129
78*************************************************************8888831 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0031347 | Biological Process | regulation of defense response |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
GO:0009507 | Cellular Component | chloroplast |
Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MISGNLNNEE LGGGGCTKAE GPGAAGGAGA VVAKSPVLSS SRHWPPSTES RIVRVSRVFG 60 GKDRHSKVRT VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLD AAQDEIDKLP 120 PLQFPPQGQD LVAHLPPSMV APFANVAADR AAAAAAAANA SAAMAEGGKR HCHGGIKGLM 180 GMGLNNSIGL ANATMPLAHG LYYTPGESWT NGGNAAVHDH QVSHGGTSPQ TVAHHSPFSS 240 LLSLAAPGPQ LVFYSPEGGG FAMKEATDHQ FAVDSLDHSQ GQLSLSSARS FLHPGNQG
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT060684 | 0.0 | BT060684.1 Zea mays full-length cDNA clone ZM_BFb0034B20 mRNA, complete cds. |
GenBank | BT067152 | 0.0 | BT067152.1 Zea mays full-length cDNA clone ZM_BFb0213O04 mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G60970.1 | 4e-42 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |