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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G110582_P03 |
Common Name | MADS71, si603017c03(382), ZEAMMB73_814205 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
M-type_MADS |
Protein Properties |
Length: 223aa MW: 24935.8 Da PI: 10.9051 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G110582_P03 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 48.4 | 1.2e-15 | 51 | 95 | 2 | 46 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
ie+ + qvtfskR+ g+ KKA+EL LC+ va++ifs+ k+
GRMZM2G110582_P03 51 HIEDGGRLQVTFSKRKSGLQKKASELFLLCGSPVAIVIFSPGKKV 95
58999999********************************98887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MLAPPLIGIE KKNIGLGTWS RGRKLEKQDS RRTTTAMGRP SRGRQRIEIR HIEDGGRLQV 60 TFSKRKSGLQ KKASELFLLC GSPVAIVIFS PGKKVFALGT PSVDHVLRRY APIPGEEEED 120 GLLPVLQDTD DVSAITDRVE VEGIVRRTEE TKARSVMEKA RMDAIGKTVR QTAAKAGRKF 180 WWEADSGKLG EAELPEFAKV LRRLRVNLQR HLDSLSASTR QLQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT041742 | 0.0 | BT041742.2 Zea mays full-length cDNA clone ZM_BFb0042I18 mRNA, complete cds. |