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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G110541_P01 |
Common Name | Zm.143689 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
DBB |
Protein Properties |
Length: 142aa MW: 15378.8 Da PI: 9.4526 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G110541_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 17.2 | 1e-05 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
C+ + + ++ fC + lCe C H+ H++ +
GRMZM2G110541_P01 4 QCDVCAAEAASVFCCAVEAALCEACDRRVHRAnklagkHRRLS 46
7*****************************7688888888765 PP
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2 | zf-B_box | 29.8 | 1.2e-09 | 63 | 104 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
++ C+ ++ek+ lfC++++ lC+dC + H Ht
GRMZM2G110541_P01 63 PPLCDICQEKRGLLFCKEDRAILCPDCDVPVHTAselamrHT 104
689**************************9995566666666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MKVQCDVCAA EAASVFCCAV EAALCEACDR RVHRANKLAG KHRRLSLLSP AAPSSSAQQT 60 PPPPLCDICQ EKRGLLFCKE DRAILCPDCD VPVHTASELA MRHTRFLLTG VRLSGSPQSP 120 PRARRRRRRT RTTAAAAASP ST
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 123 | 130 | RRRRRRTR |
2 | 124 | 129 | RRRRRT |
Functional Description ? help
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Source |
Description |
UniProt | Acts as positive regulator of seedling photomorphogenesis. Plays a negative role in brassinosteroid responses. {ECO:0000269|PubMed:22535582}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728397 | 0.0 | KJ728397.1 Zea mays clone pUT6681 orphans transcription factor (Orphan134) mRNA, partial cds. |