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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G100709_P01 |
Common Name | LOC100281236, Zm.132463 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 256aa MW: 28085.3 Da PI: 7.9324 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G100709_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 94 | 1.2e-29 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+eLH++Fv ave LGG+++AtPk+il+lm+vkg+++ h+kSHLQ+YR+
GRMZM2G100709_P01 18 PRMRWTEELHRQFVLAVECLGGQDEATPKQILQLMGVKGVSICHIKSHLQMYRS 71
8****************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MRGFERKGVR QYNRSEVPRM RWTEELHRQF VLAVECLGGQ DEATPKQILQ LMGVKGVSIC 60 HIKSHLQMYR SSSSSSSSTH NQSSSLQKLT STTASNSKRV FLSREDHASQ ADGSTPASDE 120 NIYTTMLCGC SHSTPYQIRP SLEGVFRGLE QTRMLATTEK SISRPSHTEK QHTGCDLTLS 180 IGLWAEDASS NDVDGSSSIS EELMPAAPAA GARRAAAVKE ESEAAALNLD LTISSSYWLA 240 LTSDDGARRR TAGWRR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-15 | 19 | 72 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-15 | 19 | 72 | 4 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU956037 | 0.0 | EU956037.1 Zea mays clone 1555999 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds. |