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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G100318_P01 |
Common Name | ZEAMMB73_997394, Zm.162597 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
ARR-B |
Protein Properties |
Length: 598aa MW: 66358.2 Da PI: 4.9984 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G100318_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 82 | 6.6e-26 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl
GRMZM2G100318_P01 208 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVHGLTRENVASHLQKYRL 261
68*******************.9*******************************8 PP
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2 | Response_reg | 39 | 4.3e-14 | 57 | 151 | 26 | 109 |
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHT........TTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHH CS
Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkei.reee........pklpiivvtahgeeedalealkaGakdflsKpfdpee 106
v+++ ++ al++l+e++ +D+++ D++mp+mdG++ll+ i e + + v++ ge + + + ++ Ga d+l Kp+ ++e
GRMZM2G100318_P01 57 VTTCGLASVALQILRERRnkFDIVISDVNMPDMDGFKLLELIgLEMDlpvistklLQSVSTVMSIDGETSRVMKGVHHGACDYLLKPVRMKE 148
44666778899999888788**********************666666554433323444589999************************** PP
HHH CS
Response_reg 107 lvk 109
l++
GRMZM2G100318_P01 149 LRN 151
987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 598 aa
Download sequence Send
to blast |
MALADATAFP YGLRVLVVDD DPTWLKILEK MLRKCSYEDA MSDRTVIART GGISSCVTTC 60 GLASVALQIL RERRNKFDIV ISDVNMPDMD GFKLLELIGL EMDLPVISTK LLQSVSTVMS 120 IDGETSRVMK GVHHGACDYL LKPVRMKELR NIWQHVYRKK MHEVKEIEDG LDERGLFMRA 180 DTDTMRKRKE VDKDHADQDS SDGATAKKAR VVWSVDLHQK FVNAVNQIGF DKVGPKKILD 240 LMNVHGLTRE NVASHLQKYR LYLSRLQKQN EERIMGAARQ DFNQKGPSDN LNLRSSFQEQ 300 PGNLTNGFQH SSQKVQSQTN ILDPHLDDTK TSVPLKVPDK NGTSASDAAD HQNITGVSPL 360 GGGGVFSFER MPVNQDTKLS EAMILECQSW SGGVPPKQFM QYPKHNHERC DLLGDYSCLP 420 KPDLEHPIAP SHLYAPPPVI SMSCSVEGDV RDFSDVKPDL LGCMKSLSPA LTCTVESVSA 480 QLSDSVVSST NNDKKISSVE GLSSVKDCDF DQERNQAILL TSEEASILCS TDLTCLPDEL 540 SGYQLQGVSF GDIGLNSIDL FQCNDTMVLP GLQNNWYDDP DFSNETMEFP LLDGGLFA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU974774 | 0.0 | EU974774.1 Zea mays clone 457889 two-component response regulator ARR11 mRNA, complete cds. |