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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G100176_P01 |
Common Name | Zm.121710 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family |
G2-like |
Protein Properties |
Length: 369aa MW: 39865.8 Da PI: 7.5435 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G100176_P01 | genome | MaizeSequence | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 245 | 300 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W++eLH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
GRMZM2G100176_P01 245 KARRCWSTELHRKFVAALDQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 300
68****************************************************97 PP
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Plant Ontology ? help Back to Top |
PO Term |
PO Category |
PO Description |
PO:0006505 | anatomy | central spike of ear inflorescence |
PO:0009001 | anatomy | fruit |
PO:0009089 | anatomy | endosperm |
PO:0020126 | anatomy | tassel inflorescence |
PO:0001007 | developmental stage | pollen development stage |
PO:0001009 | developmental stage | D pollen mother cell meiosis stage |
PO:0001180 | developmental stage | plant proembryo stage |
PO:0007006 | developmental stage | IL.00 inflorescence just visible stage |
PO:0007016 | developmental stage | whole plant flowering stage |
PO:0007031 | developmental stage | mid whole plant fruit ripening stage |
PO:0007032 | developmental stage | whole plant fruit formation stage up to 10% |
PO:0007072 | developmental stage | LP.18 eighteen leaves visible stage |
PO:0007104 | developmental stage | LP.15 fifteen leaves visible stage |
PO:0007633 | developmental stage | endosperm development stage |
Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MGLDVMEIGM GADLSLDLRH FASKAVRQSK DDTPAPDMDA CIRRLEEERG KIEMFKRDLP 60 LCARLLADVI DVMKEEAGKK KTTTRRRSDR RLASAAADDE EEEADGATAD KSKWMSTAQL 120 WTGDSGREDA ESEKQDKGRC SPEARSRGAL LPFKADVGSG APAFAPLFLR TDDKAAAARV 180 GVPDLSSLLS PPATMPPADA GAEESRRQVV GFAQAAARAA AMAPSAPALG LQSQQQQQQQ 240 QQARKARRCW STELHRKFVA ALDQLGGPQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH 300 NRRAPGSGVV RQPIVLVGGL WIPQEQGSPQ SGSPHGPLHH LSTSVAAVSS AATASCEEED 360 GRSESYGWK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU960503 | 0.0 | EU960503.1 Zea mays clone 225486 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds. |